HCSGD entry for GCNT3

1. General information

Official gene symbolGCNT3
Entrez ID9245
Gene full nameglucosaminyl (N-acetyl) transferase 3, mucin type
Other gene symbolsC2/4GnT C24GNT C2GNT2 C2GNTM GNTM
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000139Golgi membraneTAScellular_component
GO:0002426Immunoglobulin production in mucosal tissueIEAbiological_process
GO:0003829Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activityIEAmolecular_function
GO:0005975Carbohydrate metabolic processNASbiological_process
GO:0006493Protein O-linked glycosylationTASbiological_process
GO:0008109N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activityIEAmolecular_function
GO:0016020MembraneTAScellular_component
GO:0016021Integral component of membraneIEAcellular_component
GO:0016266O-glycan processingTASbiological_process
GO:0043687Post-translational protein modificationTASbiological_process
GO:0044267Cellular protein metabolic processTASbiological_process
GO:0047225Acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activityIEAmolecular_function
GO:0048729Tissue morphogenesisIEAbiological_process
GO:0050892Intestinal absorptionIEAbiological_process
GO:0060993Kidney morphogenesisIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.05096966300.95909217350.49449778841.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.2559426529
GSE13712_SHEARDown-0.1044396062
GSE13712_STATICUp0.0839666997
GSE19018Up0.1170740938
GSE19899_A1Down-0.0093058862
GSE19899_A2Up0.2902623491
PubMed_21979375_A1Down-0.1084382439
PubMed_21979375_A2Up0.0815310483
GSE35957Up0.1382452126
GSE36640Up0.1503416179
GSE54402Up0.2161769578
GSE9593Up2.4903427750
GSE43922Up0.0788815332
GSE24585Up0.1707884187
GSE37065Up0.4448613085
GSE28863_A1Down-0.1662215632
GSE28863_A2Down-0.0726622862
GSE28863_A3Up0.3170734976
GSE28863_A4Up0.0550534641
GSE48662Down-0.0346284440

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT017911MicroarrayFunctional MTI (Weak)18185580
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.