Welcome to HCSGD

To systematically research the mechanism of cellular senescence, we construct the Human Cellular Senescence Gene Database (HCSGD) to integrate six types of senescence-associated information about human into one unified platform, including literature mining identified cellular senescence-associated genes and gene interactions from PubMed literature abstracts, the protein-protein interaction network from HPRD, high-throughput gene and microRNA expression profiling data from GEO, gene ontology annotations and information about which genes could be targeted by miRNAs (miRTarBase and miRecords), drugs (DRUGBANK) or compounds (ChEMBL). HCSGD provides comprehensive gene annotations, results of integrative meta-analysis and convenient links to other databases. We hope it could help you to retrieve information about cellular senescence in an easier manner and understand this important mechanism better.

Cellular senescence is an irreversible cell cycle arrest program that prevents the propagation of damaged cells at risk of malignant transformation. It has also been found to be closely related to tissue-repair, organismal aging and age-related degenerative diseases.

Database Overview

data sources of the database

HCSGD Database Statistics

Build Last Updated: Feb 12, 2017
Literature Mining Network: 396 genes, 756 edges
PPI sub-network: 298 genes, 402 edges
Literature Mining statistics: 8792 articles, 2336 genes
Affymetrix microarray data: 20 series data

Citation

Dong Q, and et al. (2017). HCSGD: An integrated database of human cellular senescence genes. J Genet Genomics, https://doi.org/10.1016/j.jgg.2017.04.001

Ageing-related Datbase

Here're some links about the databases associated with aging or senescence.

LCD: Leaf Senescence Database
Senescence.info: senescence.info
HAGR: Human Ageing Genomic Resources

A demo for HCSGD

Publications in NCBI PubMed

NCBI PubMed: cellular senescence

publication count