HCSGD entry for GCNT3

1. General information

Official gene symbolGCNT3
Entrez ID9245
Gene full nameglucosaminyl (N-acetyl) transferase 3, mucin type
Other gene symbolsC2/4GnT C24GNT C2GNT2 C2GNTM GNTM
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000139Golgi membraneTAScellular_component
GO:0002426Immunoglobulin production in mucosal tissueIEAbiological_process
GO:0003829Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activityIEAmolecular_function
GO:0005975Carbohydrate metabolic processNASbiological_process
GO:0006493Protein O-linked glycosylationTASbiological_process
GO:0008109N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activityIEAmolecular_function
GO:0016020MembraneTAScellular_component
GO:0016021Integral component of membraneIEAcellular_component
GO:0016266O-glycan processingTASbiological_process
GO:0043687Post-translational protein modificationTASbiological_process
GO:0044267Cellular protein metabolic processTASbiological_process
GO:0047225Acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activityIEAmolecular_function
GO:0048729Tissue morphogenesisIEAbiological_process
GO:0050892Intestinal absorptionIEAbiological_process
GO:0060993Kidney morphogenesisIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.05096966300.95909217350.49449778841.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.2559426529
GSE13712_SHEARDown-0.1044396062
GSE13712_STATICUp0.0839666997
GSE19018Up0.1170740938
GSE19899_A1Down-0.0093058862
GSE19899_A2Up0.2902623491
PubMed_21979375_A1Down-0.1084382439
PubMed_21979375_A2Up0.0815310483
GSE35957Up0.1382452126
GSE36640Up0.1503416179
GSE54402Up0.2161769578
GSE9593Up2.4903427750
GSE43922Up0.0788815332
GSE24585Up0.1707884187
GSE37065Up0.4448613085
GSE28863_A1Down-0.1662215632
GSE28863_A2Down-0.0726622862
GSE28863_A3Up0.3170734976
GSE28863_A4Up0.0550534641
GSE48662Down-0.0346284440

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT017911MicroarrayFunctional MTI (Weak)18185580
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.