HCSGD entry for TRIM47

1. General information

Official gene symbolTRIM47
Entrez ID91107
Gene full nametripartite motif containing 47
Other gene symbolsGOA RNF100
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005634NucleusIEAcellular_component
GO:0005737CytoplasmIEAcellular_component
GO:0008270Zinc ion bindingIEAmolecular_function
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.13779750390.64780361310.74767431461.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0830224225
GSE13712_SHEARUp0.3146739908
GSE13712_STATICUp0.2045761017
GSE19018Down-0.2131961775
GSE19899_A1Down-0.1354501673
GSE19899_A2Down-0.0967061474
PubMed_21979375_A1Up0.8593067416
PubMed_21979375_A2Up0.0595033774
GSE35957Down-1.0237988124
GSE36640Down-0.2568553275
GSE54402Down-0.0687308949
GSE9593Up0.7175011311
GSE43922Up0.1586750096
GSE24585Down-0.0314965362
GSE37065Up0.1160924009
GSE28863_A1Up0.1725019390
GSE28863_A2Up0.4009994347
GSE28863_A3Up0.2497286742
GSE28863_A4Up0.0893067208
GSE48662Down-0.1847620565

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-7-5pMIMAT0000252MIRT025905MicroarrayFunctional MTI (Weak)19073608
Entries Per Page
Displaying Page of
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.