HCSGD entry for SNX21
1. General information
| Official gene symbol | SNX21 |
|---|---|
| Entrez ID | 90203 |
| Gene full name | sorting nexin family member 21 |
| Other gene symbols | C20orf161 PP3993 SNX-L dJ337O18.4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0007154 | Cell communication | IEA | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0030659 | Cytoplasmic vesicle membrane | IEA | cellular_component |
| GO:0035091 | Phosphatidylinositol binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2845520611 | 0.4398581247 | 0.9837195823 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1598449821 |
| GSE13712_SHEAR | Down | -0.2289245292 |
| GSE13712_STATIC | Down | -0.2620887980 |
| GSE19018 | Down | -0.1599285607 |
| GSE19899_A1 | Up | 0.0243800488 |
| GSE19899_A2 | Up | 0.1317888253 |
| PubMed_21979375_A1 | Up | 0.7255551235 |
| PubMed_21979375_A2 | Down | -0.3474239272 |
| GSE35957 | Down | -0.0002564012 |
| GSE36640 | Up | 0.0062509455 |
| GSE54402 | Down | -0.6328545652 |
| GSE9593 | Down | -0.0300265732 |
| GSE43922 | Up | 0.0569066845 |
| GSE24585 | Up | 0.2113880505 |
| GSE37065 | Down | -0.1770255815 |
| GSE28863_A1 | Up | 0.6294533479 |
| GSE28863_A2 | Up | 0.2550873832 |
| GSE28863_A3 | Down | -0.1031668331 |
| GSE28863_A4 | Up | 0.0791790192 |
| GSE48662 | Up | 0.3209896407 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
