HCSGD entry for SNX21

1. General information

Official gene symbolSNX21
Entrez ID90203
Gene full namesorting nexin family member 21
Other gene symbolsC20orf161 PP3993 SNX-L dJ337O18.4
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0007154Cell communicationIEAbiological_process
GO:0015031Protein transportIEAbiological_process
GO:0030659Cytoplasmic vesicle membraneIEAcellular_component
GO:0035091Phosphatidylinositol bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.28455206110.43985812470.98371958231.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1598449821
GSE13712_SHEARDown-0.2289245292
GSE13712_STATICDown-0.2620887980
GSE19018Down-0.1599285607
GSE19899_A1Up0.0243800488
GSE19899_A2Up0.1317888253
PubMed_21979375_A1Up0.7255551235
PubMed_21979375_A2Down-0.3474239272
GSE35957Down-0.0002564012
GSE36640Up0.0062509455
GSE54402Down-0.6328545652
GSE9593Down-0.0300265732
GSE43922Up0.0569066845
GSE24585Up0.2113880505
GSE37065Down-0.1770255815
GSE28863_A1Up0.6294533479
GSE28863_A2Up0.2550873832
GSE28863_A3Down-0.1031668331
GSE28863_A4Up0.0791790192
GSE48662Up0.3209896407

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.