HCSGD entry for ATG16L2

1. General information

Official gene symbolATG16L2
Entrez ID89849
Gene full nameautophagy related 16-like 2 (S. cerevisiae)
Other gene symbolsATG16B WDR80
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005737CytoplasmIEAcellular_component
GO:0006914AutophagyIEAbiological_process
GO:0015031Protein transportIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.70699194180.58564077350.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0292389373
GSE13712_SHEARDown-0.3943839627
GSE13712_STATICUp0.0847587486
GSE19018Up0.1374869532
GSE19899_A1Up0.0550164084
GSE19899_A2Down-0.2398103156
PubMed_21979375_A1Down-0.1518199190
PubMed_21979375_A2Down-0.1049071413
GSE35957Down-0.1285190868
GSE36640Down-0.0706731215
GSE54402Up0.1001713317
GSE9593Down-0.1143394555
GSE43922Up0.0335580896
GSE24585Up0.1393495216
GSE37065Up0.2331054570
GSE28863_A1Down-0.0258552303
GSE28863_A2Down-0.1415597133
GSE28863_A3Up0.2205096378
GSE28863_A4Up0.0988569188
GSE48662Up0.0212632174

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT017121MicroarrayFunctional MTI (Weak)18185580
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.