HCSGD entry for PPFIBP1

1. General information

Official gene symbolPPFIBP1
Entrez ID8496
Gene full namePTPRF interacting protein, binding protein 1 (liprin beta 1)
Other gene symbolsL2 SGT2 hSGT2 hSgt2p
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005886Plasma membraneNAScellular_component
GO:0007155Cell adhesionTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.11212868810.97024525660.69136920741.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1062199417
GSE13712_SHEARUp0.2234741299
GSE13712_STATICUp0.1886882704
GSE19018Up0.0854723781
GSE19899_A1Up0.2169041068
GSE19899_A2Up0.1770838273
PubMed_21979375_A1Down-0.2383112533
PubMed_21979375_A2Up0.1362668144
GSE35957Down-0.4747783776
GSE36640Up0.1296500701
GSE54402Up0.0855577414
GSE9593Up0.2690303608
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1Up0.2541546029
GSE28863_A2Up0.0717908891
GSE28863_A3Up0.0790333256
GSE28863_A4Up0.0740798641
GSE48662Up0.7252151613

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT017273MicroarrayFunctional MTI (Weak)18185580
hsa-miR-155-5pMIMAT0000646MIRT020577ProteomicsFunctional MTI (Weak)18668040
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.