HCSGD entry for PPFIBP1
1. General information
| Official gene symbol | PPFIBP1 |
|---|---|
| Entrez ID | 8496 |
| Gene full name | PTPRF interacting protein, binding protein 1 (liprin beta 1) |
| Other gene symbols | L2 SGT2 hSGT2 hSgt2p |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | NAS | cellular_component |
| GO:0007155 | Cell adhesion | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1121286881 | 0.9702452566 | 0.6913692074 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1062199417 |
| GSE13712_SHEAR | Up | 0.2234741299 |
| GSE13712_STATIC | Up | 0.1886882704 |
| GSE19018 | Up | 0.0854723781 |
| GSE19899_A1 | Up | 0.2169041068 |
| GSE19899_A2 | Up | 0.1770838273 |
| PubMed_21979375_A1 | Down | -0.2383112533 |
| PubMed_21979375_A2 | Up | 0.1362668144 |
| GSE35957 | Down | -0.4747783776 |
| GSE36640 | Up | 0.1296500701 |
| GSE54402 | Up | 0.0855577414 |
| GSE9593 | Up | 0.2690303608 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.2541546029 |
| GSE28863_A2 | Up | 0.0717908891 |
| GSE28863_A3 | Up | 0.0790333256 |
| GSE28863_A4 | Up | 0.0740798641 |
| GSE48662 | Up | 0.7252151613 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017273 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020577 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
