HCSGD entry for FAM172A

1. General information

Official gene symbolFAM172A
Entrez ID83989
Gene full namefamily with sequence similarity 172, member A
Other gene symbolsC5orf21
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005576Extracellular regionIEAcellular_component
GO:0005783Endoplasmic reticulumIDAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.60661189160.03846215570.99999024730.3692877871

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1628510383
GSE13712_SHEARDown-0.6022166027
GSE13712_STATICDown-0.4346914549
GSE19018Up0.6852509833
GSE19899_A1Down-0.1765466905
GSE19899_A2Down-0.4186560810
PubMed_21979375_A1Down-0.7447692553
PubMed_21979375_A2Down-0.5134412271
GSE35957Up0.9772875266
GSE36640Up0.3574365627
GSE54402Down-0.1587847089
GSE9593Up0.2484952374
GSE43922Down-0.4310493425
GSE24585Up0.0047662534
GSE37065Down-0.4440403304
GSE28863_A1Up0.0995383288
GSE28863_A2Down-0.0373459384
GSE28863_A3Down-0.1500291173
GSE28863_A4Down-0.4649731572
GSE48662Up0.3334257799

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-421MIMAT0003339MIRT039397CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.