HCSGD entry for TULP1

1. General information

Official gene symbolTULP1
Entrez ID7287
Gene full nametubby like protein 1
Other gene symbolsLCA15 RP14 TUBL1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001750Photoreceptor outer segmentISScellular_component
GO:0001917Photoreceptor inner segmentISScellular_component
GO:0005515Protein bindingIPImolecular_function
GO:0005546Phosphatidylinositol-4,5-bisphosphate bindingIDAmolecular_function
GO:0005576Extracellular regionIEAcellular_component
GO:0005737CytoplasmIEAcellular_component
GO:0005886Plasma membraneIDAcellular_component
GO:0006909PhagocytosisIEAbiological_process
GO:0007601Visual perceptionIEAbiological_process
GO:0007602PhototransductionIEAbiological_process
GO:0008020G-protein coupled photoreceptor activityIEAmolecular_function
GO:0016358Dendrite developmentISSbiological_process
GO:0030054Cell junctionIEAcellular_component
GO:0042462Eye photoreceptor cell developmentISSbiological_process
GO:0042995Cell projectionIDAcellular_component
GO:0045202SynapseISScellular_component
GO:0045494Photoreceptor cell maintenanceISSbiological_process
GO:0050766Positive regulation of phagocytosisIDAbiological_process
GO:0051015Actin filament bindingIDAmolecular_function
GO:0060041Retina development in camera-type eyeIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.35512939100.72830951330.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1282782745
GSE13712_SHEARUp0.1414310819
GSE13712_STATICDown-0.1408610256
GSE19018Up0.1038687893
GSE19899_A1Up0.0249525349
GSE19899_A2Up0.2293525631
PubMed_21979375_A1Down-0.1709205216
PubMed_21979375_A2Up0.2644548594
GSE35957Up0.2464750264
GSE36640Up0.0959078623
GSE54402Down-0.0870136183
GSE9593Up0.3704859126
GSE43922Up0.0261317361
GSE24585Down-0.0993916034
GSE37065Down-0.0335900286
GSE28863_A1Down-0.2028563344
GSE28863_A2Down-0.0529196567
GSE28863_A3Up0.3913382205
GSE28863_A4Up0.1686589744
GSE48662Down-0.0522397639

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.