HCSGD entry for TAF12

1. General information

Official gene symbolTAF12
Entrez ID6883
Gene full nameTAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
Other gene symbolsTAF2J TAFII20
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000125PCAF complexIDAcellular_component
GO:0003677DNA bindingIDAmolecular_function
GO:0003700Sequence-specific DNA binding transcription factor activityIDAmolecular_function
GO:0003713Transcription coactivator activityIDAmolecular_function
GO:0004402Histone acetyltransferase activityIDAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005654NucleoplasmTAScellular_component
GO:0005669Transcription factor TFIID complexIDAcellular_component
GO:0006352DNA-templated transcription, initiationIDAbiological_process
GO:0006366Transcription from RNA polymerase II promoterTASbiological_process
GO:0006367Transcription initiation from RNA polymerase II promoterIDA TASbiological_process
GO:0006368Transcription elongation from RNA polymerase II promoterTASbiological_process
GO:0008134Transcription factor bindingIDAmolecular_function
GO:0010467Gene expressionTASbiological_process
GO:0016032Viral processTASbiological_process
GO:0030914STAGA complexIDA IEAcellular_component
GO:0033276Transcription factor TFTC complexIDAcellular_component
GO:0043966Histone H3 acetylationIDAbiological_process
GO:0046982Protein heterodimerization activityIEAmolecular_function
GO:0051091Positive regulation of sequence-specific DNA binding transcription factor activityIDAbiological_process
GO:2001141Regulation of RNA biosynthetic processIDAbiological_process
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.00644426500.70055318950.21167189051.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.9598024860
GSE13712_SHEARUp0.0947353194
GSE13712_STATICUp0.2678158662
GSE19018Down-0.4959326998
GSE19899_A1Up1.0030725253
GSE19899_A2Up0.6888745779
PubMed_21979375_A1Up1.9796732761
PubMed_21979375_A2Up0.7513042831
GSE35957Down-0.6100309171
GSE36640Up0.2200659300
GSE54402Up0.4493455266
GSE9593Down-0.1554336685
GSE43922Up0.6559309516
GSE24585Up0.9307047152
GSE37065Down-0.1694109148
GSE28863_A1Down-0.1433144576
GSE28863_A2Up0.3201623649
GSE28863_A3Down-0.4137534051
GSE28863_A4Down-0.1745320295
GSE48662Up0.0077185163

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-92b-3pMIMAT0003218MIRT040579CLASHFunctional MTI (Weak)23622248
Entries Per Page
Displaying Page of
    • mirRecord

MicroRNA name

mirBase ID

Target site number

MiRNA mature ID

Test method inter

MiRNA regulation site

Reporter target site

Pubmed ID

hsa-miR-26b-5pMIMAT0000083NAhsa-miR-26b20831567
Entries Per Page
Displaying Page of

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.