HCSGD entry for TAF12

1. General information

Official gene symbolTAF12
Entrez ID6883
Gene full nameTAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
Other gene symbolsTAF2J TAFII20
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000125PCAF complexIDAcellular_component
GO:0003677DNA bindingIDAmolecular_function
GO:0003700Sequence-specific DNA binding transcription factor activityIDAmolecular_function
GO:0003713Transcription coactivator activityIDAmolecular_function
GO:0004402Histone acetyltransferase activityIDAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005654NucleoplasmTAScellular_component
GO:0005669Transcription factor TFIID complexIDAcellular_component
GO:0006352DNA-templated transcription, initiationIDAbiological_process
GO:0006366Transcription from RNA polymerase II promoterTASbiological_process
GO:0006367Transcription initiation from RNA polymerase II promoterIDA TASbiological_process
GO:0006368Transcription elongation from RNA polymerase II promoterTASbiological_process
GO:0008134Transcription factor bindingIDAmolecular_function
GO:0010467Gene expressionTASbiological_process
GO:0016032Viral processTASbiological_process
GO:0030914STAGA complexIDA IEAcellular_component
GO:0033276Transcription factor TFTC complexIDAcellular_component
GO:0043966Histone H3 acetylationIDAbiological_process
GO:0046982Protein heterodimerization activityIEAmolecular_function
GO:0051091Positive regulation of sequence-specific DNA binding transcription factor activityIDAbiological_process
GO:2001141Regulation of RNA biosynthetic processIDAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.00644426500.70055318950.21167189051.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.9598024860
GSE13712_SHEARUp0.0947353194
GSE13712_STATICUp0.2678158662
GSE19018Down-0.4959326998
GSE19899_A1Up1.0030725253
GSE19899_A2Up0.6888745779
PubMed_21979375_A1Up1.9796732761
PubMed_21979375_A2Up0.7513042831
GSE35957Down-0.6100309171
GSE36640Up0.2200659300
GSE54402Up0.4493455266
GSE9593Down-0.1554336685
GSE43922Up0.6559309516
GSE24585Up0.9307047152
GSE37065Down-0.1694109148
GSE28863_A1Down-0.1433144576
GSE28863_A2Up0.3201623649
GSE28863_A3Down-0.4137534051
GSE28863_A4Down-0.1745320295
GSE48662Up0.0077185163

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-92b-3pMIMAT0003218MIRT040579CLASHFunctional MTI (Weak)23622248
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  • mirRecord

MicroRNA name

mirBase ID

Target site number

MiRNA mature ID

Test method inter

MiRNA regulation site

Reporter target site

Pubmed ID

hsa-miR-26b-5pMIMAT0000083NAhsa-miR-26b20831567
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6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.