HCSGD entry for STX5

1. General information

Official gene symbolSTX5
Entrez ID6811
Gene full namesyntaxin 5
Other gene symbolsSED5 STX5A
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000139Golgi membraneIEAcellular_component
GO:0005484SNAP receptor activityIDA IEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005730NucleolusIDAcellular_component
GO:0005783Endoplasmic reticulumIEAcellular_component
GO:0005794Golgi apparatusIDAcellular_component
GO:0006886Intracellular protein transportIEAbiological_process
GO:0006888ER to Golgi vesicle-mediated transportIEAbiological_process
GO:0006903Vesicle targetingTASbiological_process
GO:0016020MembraneIEAcellular_component
GO:0016021Integral component of membraneIEAcellular_component
GO:0016192Vesicle-mediated transportIEAbiological_process
GO:0031201SNARE complexIEA TAScellular_component
GO:0033116Endoplasmic reticulum-Golgi intermediate compartment membraneIEAcellular_component
GO:0042147Retrograde transport, endosome to GolgiIDAbiological_process
GO:0047485Protein N-terminus bindingIPImolecular_function
GO:0048280Vesicle fusion with Golgi apparatusIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.15641343410.35057071920.78544307221.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0287593369
GSE13712_SHEARDown-0.2482217269
GSE13712_STATICDown-0.3207806793
GSE19018Up0.0540255909
GSE19899_A1Down-0.3074319153
GSE19899_A2Up0.6251275152
PubMed_21979375_A1Up0.3520263949
PubMed_21979375_A2Up0.3446858820
GSE35957Up0.3845421497
GSE36640Down-0.0015987200
GSE54402Up0.6528732414
GSE9593Down-0.1488815081
GSE43922Down-0.0398631274
GSE24585Up0.4998952295
GSE37065Down-0.0734204252
GSE28863_A1Up0.0748533539
GSE28863_A2Down-0.0257528685
GSE28863_A3Down-0.8154655696
GSE28863_A4Down-0.0084893764
GSE48662Up0.1167678977

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-155-5pMIMAT0000646MIRT021024ProteomicsFunctional MTI (Weak)18668040
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.