HCSGD entry for STX5

1. General information

Official gene symbolSTX5
Entrez ID6811
Gene full namesyntaxin 5
Other gene symbolsSED5 STX5A
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000139Golgi membraneIEAcellular_component
GO:0005484SNAP receptor activityIDA IEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005730NucleolusIDAcellular_component
GO:0005783Endoplasmic reticulumIEAcellular_component
GO:0005794Golgi apparatusIDAcellular_component
GO:0006886Intracellular protein transportIEAbiological_process
GO:0006888ER to Golgi vesicle-mediated transportIEAbiological_process
GO:0006903Vesicle targetingTASbiological_process
GO:0016020MembraneIEAcellular_component
GO:0016021Integral component of membraneIEAcellular_component
GO:0016192Vesicle-mediated transportIEAbiological_process
GO:0031201SNARE complexIEA TAScellular_component
GO:0033116Endoplasmic reticulum-Golgi intermediate compartment membraneIEAcellular_component
GO:0042147Retrograde transport, endosome to GolgiIDAbiological_process
GO:0047485Protein N-terminus bindingIPImolecular_function
GO:0048280Vesicle fusion with Golgi apparatusIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.15641343410.35057071920.78544307221.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0287593369
GSE13712_SHEARDown-0.2482217269
GSE13712_STATICDown-0.3207806793
GSE19018Up0.0540255909
GSE19899_A1Down-0.3074319153
GSE19899_A2Up0.6251275152
PubMed_21979375_A1Up0.3520263949
PubMed_21979375_A2Up0.3446858820
GSE35957Up0.3845421497
GSE36640Down-0.0015987200
GSE54402Up0.6528732414
GSE9593Down-0.1488815081
GSE43922Down-0.0398631274
GSE24585Up0.4998952295
GSE37065Down-0.0734204252
GSE28863_A1Up0.0748533539
GSE28863_A2Down-0.0257528685
GSE28863_A3Down-0.8154655696
GSE28863_A4Down-0.0084893764
GSE48662Up0.1167678977

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-155-5pMIMAT0000646MIRT021024ProteomicsFunctional MTI (Weak)18668040
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.