HCSGD entry for BRDT

1. General information

Official gene symbolBRDT
Entrez ID676
Gene full namebromodomain, testis-specific
Other gene symbolsBRD6 CT9
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001207Histone displacementIEA ISSbiological_process
GO:0003713Transcription coactivator activityTASmolecular_function
GO:0005634NucleusIEA ISScellular_component
GO:0006338Chromatin remodelingIEA ISSbiological_process
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006397MRNA processingIEAbiological_process
GO:0007140Male meiosisISSbiological_process
GO:0007141Male meiosis IIEA ISSbiological_process
GO:0007283SpermatogenesisIEA ISSbiological_process
GO:0008380RNA splicingIEAbiological_process
GO:0030154Cell differentiationIEAbiological_process
GO:0042393Histone bindingIDAmolecular_function
GO:0043484Regulation of RNA splicingIEA ISSbiological_process
GO:0051039Positive regulation of transcription during meiosisIEA ISSbiological_process
GO:0070577Histone acetyl-lysine bindingIEA ISSmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.34476337530.96246926030.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0637520657
GSE13712_SHEARUp0.1426921667
GSE13712_STATICUp0.0281201243
GSE19018Up0.3350212899
GSE19899_A1Down-0.0288173476
GSE19899_A2Up0.0519084366
PubMed_21979375_A1Up0.1640959479
PubMed_21979375_A2Up0.0732094008
GSE35957Up0.2559059472
GSE36640Up0.1173242443
GSE54402Up0.0188494962
GSE9593Up0.2709203721
GSE43922Up0.0178024889
GSE24585Up0.1418314256
GSE37065Up0.0426568535
GSE28863_A1Down-0.0498838727
GSE28863_A2Up0.0680795527
GSE28863_A3Up0.0604860026
GSE28863_A4Up0.0288402906
GSE48662Down-0.0111629695

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-1MIMAT0000416MIRT023817MicroarrayFunctional MTI (Weak)18668037
hsa-miR-26b-5pMIMAT0000083MIRT029810MicroarrayFunctional MTI (Weak)19088304
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.