HCSGD entry for SUMO3
1. General information
| Official gene symbol | SUMO3 |
|---|---|
| Entrez ID | 6612 |
| Gene full name | small ubiquitin-like modifier 3 |
| Other gene symbols | SMT3A SMT3H1 SUMO-3 Smt3B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000776 | Kinetochore | TAS | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0016604 | Nuclear body | IEA | cellular_component |
| GO:0016925 | Protein sumoylation | IDA IEA TAS | biological_process |
| GO:0019789 | SUMO ligase activity | IEA | molecular_function |
| GO:0034504 | Protein localization to nucleus | IEA | biological_process |
| GO:2000060 | Positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8428276015 | 0.0962179514 | 0.9999902473 | 0.5915797010 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0369522218 |
| GSE13712_SHEAR | Down | -0.0735896185 |
| GSE13712_STATIC | Down | -0.0210135237 |
| GSE19018 | Up | 0.3987274672 |
| GSE19899_A1 | Down | -0.8251890442 |
| GSE19899_A2 | Down | -0.1890383361 |
| PubMed_21979375_A1 | Down | -0.9774824616 |
| PubMed_21979375_A2 | Down | -1.0760646183 |
| GSE35957 | Up | 0.1921264649 |
| GSE36640 | Down | -0.4220524871 |
| GSE54402 | Down | -0.0199401585 |
| GSE9593 | Up | 0.2011626596 |
| GSE43922 | Down | -0.4168202765 |
| GSE24585 | Up | 0.2471861813 |
| GSE37065 | Down | -0.0831165646 |
| GSE28863_A1 | Up | 0.0923949804 |
| GSE28863_A2 | Up | 0.1092446673 |
| GSE28863_A3 | Down | -0.2397727615 |
| GSE28863_A4 | Up | 0.1230961303 |
| GSE48662 | Down | -0.2314272641 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-24-3p | MIMAT0000080 | MIRT030396 | Microarray | Functional MTI (Weak) | 19748357 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
