HCSGD entry for SUMO3


1. General information

Official gene symbolSUMO3
Entrez ID6612
Gene full namesmall ubiquitin-like modifier 3
Other gene symbolsSMT3A SMT3H1 SUMO-3 Smt3B
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000776KinetochoreTAScellular_component
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIEAcellular_component
GO:0005654NucleoplasmTAScellular_component
GO:0005737CytoplasmIEAcellular_component
GO:0016604Nuclear bodyIEAcellular_component
GO:0016925Protein sumoylationIDA IEA TASbiological_process
GO:0019789SUMO ligase activityIEAmolecular_function
GO:0034504Protein localization to nucleusIEAbiological_process
GO:2000060Positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic processIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.84282760150.09621795140.99999024730.5915797010

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0369522218
GSE13712_SHEARDown-0.0735896185
GSE13712_STATICDown-0.0210135237
GSE19018Up0.3987274672
GSE19899_A1Down-0.8251890442
GSE19899_A2Down-0.1890383361
PubMed_21979375_A1Down-0.9774824616
PubMed_21979375_A2Down-1.0760646183
GSE35957Up0.1921264649
GSE36640Down-0.4220524871
GSE54402Down-0.0199401585
GSE9593Up0.2011626596
GSE43922Down-0.4168202765
GSE24585Up0.2471861813
GSE37065Down-0.0831165646
GSE28863_A1Up0.0923949804
GSE28863_A2Up0.1092446673
GSE28863_A3Down-0.2397727615
GSE28863_A4Up0.1230961303
GSE48662Down-0.2314272641

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-24-3pMIMAT0000080MIRT030396MicroarrayFunctional MTI (Weak)19748357
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.