HCSGD entry for SEMA3F
1. General information
| Official gene symbol | SEMA3F |
|---|---|
| Entrez ID | 6405 |
| Gene full name | sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F |
| Other gene symbols | SEMA-IV SEMA4 SEMAK |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001755 | Neural crest cell migration | IEA | biological_process |
| GO:0004872 | Receptor activity | IEA | molecular_function |
| GO:0005615 | Extracellular space | TAS | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007411 | Axon guidance | IDA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0021675 | Nerve development | ISS | biological_process |
| GO:0045499 | Chemorepellent activity | IDA | molecular_function |
| GO:0048843 | Negative regulation of axon extension involved in axon guidance | IEA | biological_process |
| GO:0048846 | Axon extension involved in axon guidance | ISS | biological_process |
| GO:0061549 | Sympathetic ganglion development | ISS | biological_process |
| GO:0097490 | Sympathetic neuron projection extension | ISS | biological_process |
| GO:0097491 | Sympathetic neuron projection guidance | ISS | biological_process |
| GO:1902285 | Semaphorin-plexin signaling pathway involved in neuron projection guidance | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1529689639 | 0.2493070818 | 0.7798500872 | 0.9590832554 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0283078430 |
| GSE13712_SHEAR | Up | 0.4010140640 |
| GSE13712_STATIC | Up | 1.0775606470 |
| GSE19018 | Up | 0.3733132378 |
| GSE19899_A1 | Down | -0.3434024781 |
| GSE19899_A2 | Down | -0.0728089923 |
| PubMed_21979375_A1 | Down | -0.5072915911 |
| PubMed_21979375_A2 | Down | -0.2405631742 |
| GSE35957 | Down | -0.2065397620 |
| GSE36640 | Down | -0.3162017020 |
| GSE54402 | Down | -0.1002039349 |
| GSE9593 | Down | -0.1431331522 |
| GSE43922 | Down | -0.5669043844 |
| GSE24585 | Up | 0.1740552671 |
| GSE37065 | Up | 0.2013051792 |
| GSE28863_A1 | Up | 0.6402932605 |
| GSE28863_A2 | Up | 0.2102769520 |
| GSE28863_A3 | Up | 0.2599373701 |
| GSE28863_A4 | Down | -0.0721106122 |
| GSE48662 | Up | 0.0339348807 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
