HCSGD entry for SEMA3F

1. General information

Official gene symbolSEMA3F
Entrez ID6405
Gene full namesema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
Other gene symbolsSEMA-IV SEMA4 SEMAK
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001755Neural crest cell migrationIEAbiological_process
GO:0004872Receptor activityIEAmolecular_function
GO:0005615Extracellular spaceTAScellular_component
GO:0007275Multicellular organismal developmentIEAbiological_process
GO:0007411Axon guidanceIDAbiological_process
GO:0016020MembraneIEAcellular_component
GO:0021675Nerve developmentISSbiological_process
GO:0045499Chemorepellent activityIDAmolecular_function
GO:0048843Negative regulation of axon extension involved in axon guidanceIEAbiological_process
GO:0048846Axon extension involved in axon guidanceISSbiological_process
GO:0061549Sympathetic ganglion developmentISSbiological_process
GO:0097490Sympathetic neuron projection extensionISSbiological_process
GO:0097491Sympathetic neuron projection guidanceISSbiological_process
GO:1902285Semaphorin-plexin signaling pathway involved in neuron projection guidanceISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.15296896390.24930708180.77985008720.9590832554

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0283078430
GSE13712_SHEARUp0.4010140640
GSE13712_STATICUp1.0775606470
GSE19018Up0.3733132378
GSE19899_A1Down-0.3434024781
GSE19899_A2Down-0.0728089923
PubMed_21979375_A1Down-0.5072915911
PubMed_21979375_A2Down-0.2405631742
GSE35957Down-0.2065397620
GSE36640Down-0.3162017020
GSE54402Down-0.1002039349
GSE9593Down-0.1431331522
GSE43922Down-0.5669043844
GSE24585Up0.1740552671
GSE37065Up0.2013051792
GSE28863_A1Up0.6402932605
GSE28863_A2Up0.2102769520
GSE28863_A3Up0.2599373701
GSE28863_A4Down-0.0721106122
GSE48662Up0.0339348807

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.