HCSGD entry for LINC00474

1. General information

Official gene symbolLINC00474
Entrez ID58483
Gene full namelong intergenic non-protein coding RNA 474
Other gene symbolsC9orf27 EST-YD1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003674Molecular_functionNDmolecular_function
GO:0005575Cellular_componentNDcellular_component
GO:0008150Biological_processNDbiological_process
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.25166315870.93186688200.94150754581.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1441527680
GSE13712_SHEARDown-0.0143764863
GSE13712_STATICDown-0.2279980238
GSE19018Up0.1750339179
GSE19899_A1Up0.2234455277
GSE19899_A2Up0.3261351664
PubMed_21979375_A1Up0.3386110708
PubMed_21979375_A2Up0.5380222848
GSE35957Up0.0269240161
GSE36640Up0.0958958947
GSE54402Up0.0591301490
GSE9593Down-0.0391442930
GSE43922Up0.0259965297
GSE24585Up0.1243228328
GSE37065Down-0.0298250685
GSE28863_A1Up0.3110354305
GSE28863_A2Down-0.1344995608
GSE28863_A3Up0.0230634221
GSE28863_A4Down-0.0390242631
GSE48662Down-0.0135104159

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.