HCSGD entry for LINC00474

1. General information

Official gene symbolLINC00474
Entrez ID58483
Gene full namelong intergenic non-protein coding RNA 474
Other gene symbolsC9orf27 EST-YD1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003674Molecular_functionNDmolecular_function
GO:0005575Cellular_componentNDcellular_component
GO:0008150Biological_processNDbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.25166315870.93186688200.94150754581.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1441527680
GSE13712_SHEARDown-0.0143764863
GSE13712_STATICDown-0.2279980238
GSE19018Up0.1750339179
GSE19899_A1Up0.2234455277
GSE19899_A2Up0.3261351664
PubMed_21979375_A1Up0.3386110708
PubMed_21979375_A2Up0.5380222848
GSE35957Up0.0269240161
GSE36640Up0.0958958947
GSE54402Up0.0591301490
GSE9593Down-0.0391442930
GSE43922Up0.0259965297
GSE24585Up0.1243228328
GSE37065Down-0.0298250685
GSE28863_A1Up0.3110354305
GSE28863_A2Down-0.1344995608
GSE28863_A3Up0.0230634221
GSE28863_A4Down-0.0390242631
GSE48662Down-0.0135104159

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.