HCSGD entry for LYRM1

1. General information

Official gene symbolLYRM1
Entrez ID57149
Gene full nameLYR motif containing 1
Other gene symbolsA211C6.1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005634NucleusIEAcellular_component
GO:0005739MitochondrionIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.03693358160.79949675160.43632351891.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.6296783586
GSE13712_SHEARDown-0.1133969162
GSE13712_STATICDown-0.6385768000
GSE19018Up0.1953296122
GSE19899_A1Up0.4267799887
GSE19899_A2Up0.6564732532
PubMed_21979375_A1Up1.5594878289
PubMed_21979375_A2Up0.6771899694
GSE35957Down-0.0546241341
GSE36640Up0.0474631722
GSE54402Up0.5690070732
GSE9593Up0.1043030973
GSE43922Up0.1020861736
GSE24585Down-0.2062422022
GSE37065Down-0.0619621373
GSE28863_A1Up0.0824759720
GSE28863_A2Down-0.1478681710
GSE28863_A3Down-0.0347386866
GSE28863_A4Up0.0678331166
GSE48662Down-0.2182336925

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-455-3pMIMAT0004784MIRT037812CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.