HCSGD entry for LYRM1
1. General information
| Official gene symbol | LYRM1 |
|---|---|
| Entrez ID | 57149 |
| Gene full name | LYR motif containing 1 |
| Other gene symbols | A211C6.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0369335816 | 0.7994967516 | 0.4363235189 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.6296783586 |
| GSE13712_SHEAR | Down | -0.1133969162 |
| GSE13712_STATIC | Down | -0.6385768000 |
| GSE19018 | Up | 0.1953296122 |
| GSE19899_A1 | Up | 0.4267799887 |
| GSE19899_A2 | Up | 0.6564732532 |
| PubMed_21979375_A1 | Up | 1.5594878289 |
| PubMed_21979375_A2 | Up | 0.6771899694 |
| GSE35957 | Down | -0.0546241341 |
| GSE36640 | Up | 0.0474631722 |
| GSE54402 | Up | 0.5690070732 |
| GSE9593 | Up | 0.1043030973 |
| GSE43922 | Up | 0.1020861736 |
| GSE24585 | Down | -0.2062422022 |
| GSE37065 | Down | -0.0619621373 |
| GSE28863_A1 | Up | 0.0824759720 |
| GSE28863_A2 | Down | -0.1478681710 |
| GSE28863_A3 | Down | -0.0347386866 |
| GSE28863_A4 | Up | 0.0678331166 |
| GSE48662 | Down | -0.2182336925 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-455-3p | MIMAT0004784 | MIRT037812 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
