HCSGD entry for THUMPD1
1. General information
| Official gene symbol | THUMPD1 |
|---|---|
| Entrez ID | 55623 |
| Gene full name | THUMP domain containing 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8986209339 | 0.0744819194 | 0.9999902473 | 0.5144157964 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1857913240 |
| GSE13712_SHEAR | Down | -0.0220004588 |
| GSE13712_STATIC | Down | -0.0921624182 |
| GSE19018 | Down | -0.1193124198 |
| GSE19899_A1 | Down | -0.3233553211 |
| GSE19899_A2 | Down | -0.1466974290 |
| PubMed_21979375_A1 | Down | -0.7594061230 |
| PubMed_21979375_A2 | Down | -0.0344830731 |
| GSE35957 | Down | -0.3414772141 |
| GSE36640 | Down | -0.8091026215 |
| GSE54402 | Up | 0.0069275960 |
| GSE9593 | Down | -0.2711610595 |
| GSE43922 | Up | 0.0457858186 |
| GSE24585 | Down | -0.4599676299 |
| GSE37065 | Down | -0.0844027349 |
| GSE28863_A1 | Up | 0.5014550466 |
| GSE28863_A2 | Up | 0.5010595442 |
| GSE28863_A3 | Down | -0.1022023611 |
| GSE28863_A4 | Up | 0.0041374155 |
| GSE48662 | Down | -0.5356981026 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-10a-5p | MIMAT0000253 | MIRT025618 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT025618 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT046075 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10b-5p | MIMAT0000254 | MIRT047484 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049811 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT049931 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
