HCSGD entry for THUMPD1


1. General information

Official gene symbolTHUMPD1
Entrez ID55623
Gene full nameTHUMP domain containing 1
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003723RNA bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.89862093390.07448191940.99999024730.5144157964

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1857913240
GSE13712_SHEARDown-0.0220004588
GSE13712_STATICDown-0.0921624182
GSE19018Down-0.1193124198
GSE19899_A1Down-0.3233553211
GSE19899_A2Down-0.1466974290
PubMed_21979375_A1Down-0.7594061230
PubMed_21979375_A2Down-0.0344830731
GSE35957Down-0.3414772141
GSE36640Down-0.8091026215
GSE54402Up0.0069275960
GSE9593Down-0.2711610595
GSE43922Up0.0457858186
GSE24585Down-0.4599676299
GSE37065Down-0.0844027349
GSE28863_A1Up0.5014550466
GSE28863_A2Up0.5010595442
GSE28863_A3Down-0.1022023611
GSE28863_A4Up0.0041374155
GSE48662Down-0.5356981026

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-10a-5pMIMAT0000253MIRT025618SequencingFunctional MTI (Weak)20371350
hsa-miR-10a-5pMIMAT0000253MIRT025618CLASHFunctional MTI (Weak)23622248
hsa-miR-125b-5pMIMAT0000423MIRT046075CLASHFunctional MTI (Weak)23622248
hsa-miR-10b-5pMIMAT0000254MIRT047484CLASHFunctional MTI (Weak)23622248
hsa-miR-92a-3pMIMAT0000092MIRT049811CLASHFunctional MTI (Weak)23622248
hsa-miR-30a-5pMIMAT0000087MIRT049931CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.