HCSGD entry for CNGB3
1. General information
| Official gene symbol | CNGB3 |
|---|---|
| Entrez ID | 54714 |
| Gene full name | cyclic nucleotide gated channel beta 3 |
| Other gene symbols | ACHM1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001750 | Photoreceptor outer segment | IEA | cellular_component |
| GO:0005222 | Intracellular cAMP activated cation channel activity | IBA | molecular_function |
| GO:0005223 | Intracellular cGMP activated cation channel activity | IBA | molecular_function |
| GO:0005249 | Voltage-gated potassium channel activity | IBA | molecular_function |
| GO:0005887 | Integral component of plasma membrane | IBA | cellular_component |
| GO:0006810 | Transport | NAS | biological_process |
| GO:0007165 | Signal transduction | NAS | biological_process |
| GO:0007601 | Visual perception | IEA | biological_process |
| GO:0007603 | Phototransduction, visible light | IBA | biological_process |
| GO:0030553 | CGMP binding | IBA | molecular_function |
| GO:0034765 | Regulation of ion transmembrane transport | IBA | biological_process |
| GO:0042391 | Regulation of membrane potential | IBA | biological_process |
| GO:0051049 | Regulation of transport | IBA | biological_process |
| GO:0071805 | Potassium ion transmembrane transport | IBA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6989564036 | 0.8993109874 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0253243176 |
| GSE13712_SHEAR | Down | -0.1037335607 |
| GSE13712_STATIC | Up | 0.0806455345 |
| GSE19018 | Up | 0.2488177793 |
| GSE19899_A1 | Up | 0.1060007880 |
| GSE19899_A2 | Down | -0.0636372895 |
| PubMed_21979375_A1 | Up | 0.0898642300 |
| PubMed_21979375_A2 | Up | 0.0115535430 |
| GSE35957 | Up | 0.1078281604 |
| GSE36640 | Down | -0.0788097094 |
| GSE54402 | Down | -0.0141605489 |
| GSE9593 | Up | 0.0244712807 |
| GSE43922 | Up | 0.0183353000 |
| GSE24585 | Up | 0.1106076579 |
| GSE37065 | Down | -0.0109176183 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.0702513868 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
