HCSGD entry for CNGB3

1. General information

Official gene symbolCNGB3
Entrez ID54714
Gene full namecyclic nucleotide gated channel beta 3
Other gene symbolsACHM1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001750Photoreceptor outer segmentIEAcellular_component
GO:0005222Intracellular cAMP activated cation channel activityIBAmolecular_function
GO:0005223Intracellular cGMP activated cation channel activityIBAmolecular_function
GO:0005249Voltage-gated potassium channel activityIBAmolecular_function
GO:0005887Integral component of plasma membraneIBAcellular_component
GO:0006810TransportNASbiological_process
GO:0007165Signal transductionNASbiological_process
GO:0007601Visual perceptionIEAbiological_process
GO:0007603Phototransduction, visible lightIBAbiological_process
GO:0030553CGMP bindingIBAmolecular_function
GO:0034765Regulation of ion transmembrane transportIBAbiological_process
GO:0042391Regulation of membrane potentialIBAbiological_process
GO:0051049Regulation of transportIBAbiological_process
GO:0071805Potassium ion transmembrane transportIBAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.69895640360.89931098740.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0253243176
GSE13712_SHEARDown-0.1037335607
GSE13712_STATICUp0.0806455345
GSE19018Up0.2488177793
GSE19899_A1Up0.1060007880
GSE19899_A2Down-0.0636372895
PubMed_21979375_A1Up0.0898642300
PubMed_21979375_A2Up0.0115535430
GSE35957Up0.1078281604
GSE36640Down-0.0788097094
GSE54402Down-0.0141605489
GSE9593Up0.0244712807
GSE43922Up0.0183353000
GSE24585Up0.1106076579
GSE37065Down-0.0109176183
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.0702513868

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.