HCSGD entry for YTHDF2
1. General information
| Official gene symbol | YTHDF2 |
|---|---|
| Entrez ID | 51441 |
| Gene full name | YTH domain family, member 2 |
| Other gene symbols | HGRG8 NY-REN-2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000932 | Cytoplasmic mRNA processing body | IDA | cellular_component |
| GO:0006959 | Humoral immune response | TAS | biological_process |
| GO:0043488 | Regulation of mRNA stability | IMP | biological_process |
| GO:1990247 | N6-methyladenosine-containing RNA binding | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2393603586 | 0.8401126629 | 0.9254026714 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0266720044 |
| GSE13712_SHEAR | Down | -0.0976176892 |
| GSE13712_STATIC | Down | -0.0542167970 |
| GSE19018 | Down | -0.3388961791 |
| GSE19899_A1 | Up | 0.1534947957 |
| GSE19899_A2 | Up | 0.3738091571 |
| PubMed_21979375_A1 | Up | 0.6217342414 |
| PubMed_21979375_A2 | Up | 0.3209416036 |
| GSE35957 | Up | 0.0214795863 |
| GSE36640 | Down | -0.2153379349 |
| GSE54402 | Up | 0.1430926845 |
| GSE9593 | Down | -0.0472938500 |
| GSE43922 | Up | 0.0425224332 |
| GSE24585 | Up | 0.0145462641 |
| GSE37065 | Down | -0.0901843164 |
| GSE28863_A1 | Up | 0.0326647063 |
| GSE28863_A2 | Up | 0.3984813900 |
| GSE28863_A3 | Up | 0.2860352643 |
| GSE28863_A4 | Up | 0.1928008462 |
| GSE48662 | Down | -0.2563300786 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT023842 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040054 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044257 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
