HCSGD entry for YTHDF2


1. General information

Official gene symbolYTHDF2
Entrez ID51441
Gene full nameYTH domain family, member 2
Other gene symbolsHGRG8 NY-REN-2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000932Cytoplasmic mRNA processing bodyIDAcellular_component
GO:0006959Humoral immune responseTASbiological_process
GO:0043488Regulation of mRNA stabilityIMPbiological_process
GO:1990247N6-methyladenosine-containing RNA bindingIDAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.23936035860.84011266290.92540267141.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0266720044
GSE13712_SHEARDown-0.0976176892
GSE13712_STATICDown-0.0542167970
GSE19018Down-0.3388961791
GSE19899_A1Up0.1534947957
GSE19899_A2Up0.3738091571
PubMed_21979375_A1Up0.6217342414
PubMed_21979375_A2Up0.3209416036
GSE35957Up0.0214795863
GSE36640Down-0.2153379349
GSE54402Up0.1430926845
GSE9593Down-0.0472938500
GSE43922Up0.0425224332
GSE24585Up0.0145462641
GSE37065Down-0.0901843164
GSE28863_A1Up0.0326647063
GSE28863_A2Up0.3984813900
GSE28863_A3Up0.2860352643
GSE28863_A4Up0.1928008462
GSE48662Down-0.2563300786

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-1MIMAT0000416MIRT023842ProteomicsFunctional MTI (Weak)18668040
hsa-miR-615-3pMIMAT0003283MIRT040054CLASHFunctional MTI (Weak)23622248
hsa-miR-106b-5pMIMAT0000680MIRT044257CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.