HCSGD entry for COPS4
1. General information
| Official gene symbol | COPS4 |
|---|---|
| Entrez ID | 51138 |
| Gene full name | COP9 signalosome subunit 4 |
| Other gene symbols | CSN4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0008180 | COP9 signalosome | IDA | cellular_component |
| GO:0010388 | Cullin deneddylation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9585039816 | 0.0714350975 | 0.9999902473 | 0.5043570815 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1117587650 |
| GSE13712_SHEAR | Up | 0.0142162161 |
| GSE13712_STATIC | Down | -0.0872791749 |
| GSE19018 | Up | 0.0037917024 |
| GSE19899_A1 | Up | 0.0321621786 |
| GSE19899_A2 | Down | -0.0257645610 |
| PubMed_21979375_A1 | Up | 0.1717332570 |
| PubMed_21979375_A2 | Down | -0.1641011926 |
| GSE35957 | Up | 0.0230207677 |
| GSE36640 | Up | 0.0850858579 |
| GSE54402 | Down | -0.0962708772 |
| GSE9593 | Down | -0.0262950118 |
| GSE43922 | Down | -0.3271381492 |
| GSE24585 | Down | -0.2171772142 |
| GSE37065 | Up | 0.0070645079 |
| GSE28863_A1 | Up | 0.0116362505 |
| GSE28863_A2 | Down | -0.3871417886 |
| GSE28863_A3 | Down | -1.0470311701 |
| GSE28863_A4 | Down | -0.1368261209 |
| GSE48662 | Down | -0.4242796874 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
