HCSGD entry for COPS4

1. General information

Official gene symbolCOPS4
Entrez ID51138
Gene full nameCOP9 signalosome subunit 4
Other gene symbolsCSN4
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005730NucleolusIDAcellular_component
GO:0005737CytoplasmIEAcellular_component
GO:0008180COP9 signalosomeIDAcellular_component
GO:0010388Cullin deneddylationIDAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.95850398160.07143509750.99999024730.5043570815

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1117587650
GSE13712_SHEARUp0.0142162161
GSE13712_STATICDown-0.0872791749
GSE19018Up0.0037917024
GSE19899_A1Up0.0321621786
GSE19899_A2Down-0.0257645610
PubMed_21979375_A1Up0.1717332570
PubMed_21979375_A2Down-0.1641011926
GSE35957Up0.0230207677
GSE36640Up0.0850858579
GSE54402Down-0.0962708772
GSE9593Down-0.0262950118
GSE43922Down-0.3271381492
GSE24585Down-0.2171772142
GSE37065Up0.0070645079
GSE28863_A1Up0.0116362505
GSE28863_A2Down-0.3871417886
GSE28863_A3Down-1.0470311701
GSE28863_A4Down-0.1368261209
GSE48662Down-0.4242796874

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.