HCSGD entry for NPTX2

1. General information

Official gene symbolNPTX2
Entrez ID4885
Gene full nameneuronal pentraxin II
Other gene symbolsNARP NP-II NP2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003674Molecular_functionNDmolecular_function
GO:0005575Cellular_componentNDcellular_component
GO:0005576Extracellular regionIEAcellular_component
GO:0007268Synaptic transmissionNASbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.09359565750.79007059380.64109903751.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.4866902448
GSE13712_SHEARDown-0.0896275820
GSE13712_STATICDown-0.0860163259
GSE19018Up0.1242157782
GSE19899_A1Down-0.0016658770
GSE19899_A2Up0.0166341543
PubMed_21979375_A1Up0.1034799578
PubMed_21979375_A2Up0.1193931415
GSE35957Down-0.9113763519
GSE36640Down-0.1740405196
GSE54402Up0.6314779710
GSE9593Down-0.2940664015
GSE43922Up0.0393347518
GSE24585Up0.7657089737
GSE37065Down-0.0330992405
GSE28863_A1Down-0.1582512214
GSE28863_A2Up0.0718714931
GSE28863_A3Up0.4460262610
GSE28863_A4Down-0.1369092180
GSE48662Down-0.0007771698

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-423-3pMIMAT0001340MIRT042492CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.