HCSGD entry for NPTX2

1. General information

Official gene symbolNPTX2
Entrez ID4885
Gene full nameneuronal pentraxin II
Other gene symbolsNARP NP-II NP2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003674Molecular_functionNDmolecular_function
GO:0005575Cellular_componentNDcellular_component
GO:0005576Extracellular regionIEAcellular_component
GO:0007268Synaptic transmissionNASbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.09359565750.79007059380.64109903751.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.4866902448
GSE13712_SHEARDown-0.0896275820
GSE13712_STATICDown-0.0860163259
GSE19018Up0.1242157782
GSE19899_A1Down-0.0016658770
GSE19899_A2Up0.0166341543
PubMed_21979375_A1Up0.1034799578
PubMed_21979375_A2Up0.1193931415
GSE35957Down-0.9113763519
GSE36640Down-0.1740405196
GSE54402Up0.6314779710
GSE9593Down-0.2940664015
GSE43922Up0.0393347518
GSE24585Up0.7657089737
GSE37065Down-0.0330992405
GSE28863_A1Down-0.1582512214
GSE28863_A2Up0.0718714931
GSE28863_A3Up0.4460262610
GSE28863_A4Down-0.1369092180
GSE48662Down-0.0007771698

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-423-3pMIMAT0001340MIRT042492CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.