HCSGD entry for BLOC1S3

1. General information

Official gene symbolBLOC1S3
Entrez ID388552
Gene full namebiogenesis of lysosomal organelles complex-1, subunit 3
Other gene symbolsBLOS3 HPS8 RP
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001654Eye developmentIMPbiological_process
GO:0003674Molecular_functionNDmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005829CytosolTAScellular_component
GO:0006892Post-Golgi vesicle-mediated transportTASbiological_process
GO:0007596Blood coagulationIEAbiological_process
GO:0008089Anterograde axon cargo transportIEA ISSbiological_process
GO:0030133Transport vesicleIDAcellular_component
GO:0030168Platelet activationIMPbiological_process
GO:0031083BLOC-1 complexIDA IEAcellular_component
GO:0031175Neuron projection developmentISSbiological_process
GO:0032402Melanosome transportIDAbiological_process
GO:0032438Melanosome organizationIEA NASbiological_process
GO:0032816Positive regulation of natural killer cell activationIEAbiological_process
GO:0033299Secretion of lysosomal enzymesIEAbiological_process
GO:0035646Endosome to melanosome transportIDAbiological_process
GO:0042493Response to drugIEAbiological_process
GO:0043473PigmentationIMPbiological_process
GO:0048066Developmental pigmentationIEAbiological_process
GO:0048490Anterograde synaptic vesicle transportIEA ISSbiological_process
GO:0060155Platelet dense granule organizationIEA NASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.19106789640.86116687060.84873282151.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0089939210
GSE13712_SHEARDown-0.4771520237
GSE13712_STATICDown-0.4721572649
GSE19018Down-0.0690200826
GSE19899_A1Down-0.1198590027
GSE19899_A2Up0.2886195263
PubMed_21979375_A1Up0.8580751876
PubMed_21979375_A2Up0.8994256084
GSE35957Down-0.1040603551
GSE36640Up0.3425027665
GSE54402Up0.1608566328
GSE9593Up0.3712693047
GSE43922Up0.0140045276
GSE24585Down-0.0106263335
GSE37065Down-0.0233646008
GSE28863_A1Up0.2142016622
GSE28863_A2Up0.2901805146
GSE28863_A3Up0.1268647215
GSE28863_A4Down-0.0357722705
GSE48662Up0.2295459721

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-378a-3pMIMAT0000732MIRT043947CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.