HCSGD entry for BLOC1S3

1. General information

Official gene symbolBLOC1S3
Entrez ID388552
Gene full namebiogenesis of lysosomal organelles complex-1, subunit 3
Other gene symbolsBLOS3 HPS8 RP
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001654Eye developmentIMPbiological_process
GO:0003674Molecular_functionNDmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005829CytosolTAScellular_component
GO:0006892Post-Golgi vesicle-mediated transportTASbiological_process
GO:0007596Blood coagulationIEAbiological_process
GO:0008089Anterograde axon cargo transportIEA ISSbiological_process
GO:0030133Transport vesicleIDAcellular_component
GO:0030168Platelet activationIMPbiological_process
GO:0031083BLOC-1 complexIDA IEAcellular_component
GO:0031175Neuron projection developmentISSbiological_process
GO:0032402Melanosome transportIDAbiological_process
GO:0032438Melanosome organizationIEA NASbiological_process
GO:0032816Positive regulation of natural killer cell activationIEAbiological_process
GO:0033299Secretion of lysosomal enzymesIEAbiological_process
GO:0035646Endosome to melanosome transportIDAbiological_process
GO:0042493Response to drugIEAbiological_process
GO:0043473PigmentationIMPbiological_process
GO:0048066Developmental pigmentationIEAbiological_process
GO:0048490Anterograde synaptic vesicle transportIEA ISSbiological_process
GO:0060155Platelet dense granule organizationIEA NASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.19106789640.86116687060.84873282151.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0089939210
GSE13712_SHEARDown-0.4771520237
GSE13712_STATICDown-0.4721572649
GSE19018Down-0.0690200826
GSE19899_A1Down-0.1198590027
GSE19899_A2Up0.2886195263
PubMed_21979375_A1Up0.8580751876
PubMed_21979375_A2Up0.8994256084
GSE35957Down-0.1040603551
GSE36640Up0.3425027665
GSE54402Up0.1608566328
GSE9593Up0.3712693047
GSE43922Up0.0140045276
GSE24585Down-0.0106263335
GSE37065Down-0.0233646008
GSE28863_A1Up0.2142016622
GSE28863_A2Up0.2901805146
GSE28863_A3Up0.1268647215
GSE28863_A4Down-0.0357722705
GSE48662Up0.2295459721

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-378a-3pMIMAT0000732MIRT043947CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.