HCSGD entry for HOXD9

1. General information

Official gene symbolHOXD9
Entrez ID3235
Gene full namehomeobox D9
Other gene symbolsHOX4 HOX4C Hox-4.3 Hox-5.2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003700Sequence-specific DNA binding transcription factor activityIEAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0007519Skeletal muscle tissue developmentIEAbiological_process
GO:0008344Adult locomotory behaviorIEAbiological_process
GO:0009952Anterior/posterior pattern specificationIEAbiological_process
GO:0009954Proximal/distal pattern formationIEAbiological_process
GO:0030879Mammary gland developmentIEAbiological_process
GO:0035115Embryonic forelimb morphogenesisIEAbiological_process
GO:0035137Hindlimb morphogenesisIEAbiological_process
GO:0043565Sequence-specific DNA bindingIEAmolecular_function
GO:0045944Positive regulation of transcription from RNA polymerase II promoterIEAbiological_process
GO:0048704Embryonic skeletal system morphogenesisIEAbiological_process
GO:0048935Peripheral nervous system neuron developmentIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.33907215530.87237196160.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0498486351
GSE13712_SHEARUp0.3215978590
GSE13712_STATICUp0.2071946601
GSE19018Down-0.0066842371
GSE19899_A1Down-0.0836583073
GSE19899_A2Up0.2398793882
PubMed_21979375_A1Down-0.2793471757
PubMed_21979375_A2Down-0.0949496763
GSE35957Up0.0558692663
GSE36640Up0.1177098406
GSE54402Up0.0542636340
GSE9593Down-0.0291384403
GSE43922Up0.1120733315
GSE24585Up0.2686189808
GSE37065Down-0.0107935256
GSE28863_A1Down-0.2362038656
GSE28863_A2Up0.3076564022
GSE28863_A3Up0.4234433192
GSE28863_A4Down-0.1033658785
GSE48662Up0.0818689009

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.