HCSGD entry for HOXD9

1. General information

Official gene symbolHOXD9
Entrez ID3235
Gene full namehomeobox D9
Other gene symbolsHOX4 HOX4C Hox-4.3 Hox-5.2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003700Sequence-specific DNA binding transcription factor activityIEAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0007519Skeletal muscle tissue developmentIEAbiological_process
GO:0008344Adult locomotory behaviorIEAbiological_process
GO:0009952Anterior/posterior pattern specificationIEAbiological_process
GO:0009954Proximal/distal pattern formationIEAbiological_process
GO:0030879Mammary gland developmentIEAbiological_process
GO:0035115Embryonic forelimb morphogenesisIEAbiological_process
GO:0035137Hindlimb morphogenesisIEAbiological_process
GO:0043565Sequence-specific DNA bindingIEAmolecular_function
GO:0045944Positive regulation of transcription from RNA polymerase II promoterIEAbiological_process
GO:0048704Embryonic skeletal system morphogenesisIEAbiological_process
GO:0048935Peripheral nervous system neuron developmentIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.33907215530.87237196160.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0498486351
GSE13712_SHEARUp0.3215978590
GSE13712_STATICUp0.2071946601
GSE19018Down-0.0066842371
GSE19899_A1Down-0.0836583073
GSE19899_A2Up0.2398793882
PubMed_21979375_A1Down-0.2793471757
PubMed_21979375_A2Down-0.0949496763
GSE35957Up0.0558692663
GSE36640Up0.1177098406
GSE54402Up0.0542636340
GSE9593Down-0.0291384403
GSE43922Up0.1120733315
GSE24585Up0.2686189808
GSE37065Down-0.0107935256
GSE28863_A1Down-0.2362038656
GSE28863_A2Up0.3076564022
GSE28863_A3Up0.4234433192
GSE28863_A4Down-0.1033658785
GSE48662Up0.0818689009

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.