HCSGD entry for CNTN6
1. General information
| Official gene symbol | CNTN6 |
|---|---|
| Entrez ID | 27255 |
| Gene full name | contactin 6 |
| Other gene symbols | NB3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0007219 | Notch signaling pathway | IEA | biological_process |
| GO:0007411 | Axon guidance | TAS | biological_process |
| GO:0007417 | Central nervous system development | TAS | biological_process |
| GO:0031225 | Anchored component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4613392804 | 0.9475778086 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2320488715 |
| GSE13712_SHEAR | Down | -0.0211076210 |
| GSE13712_STATIC | Up | 0.1398540344 |
| GSE19018 | Down | -0.0337819526 |
| GSE19899_A1 | Up | 0.2053199137 |
| GSE19899_A2 | Up | 0.1508614784 |
| PubMed_21979375_A1 | Up | 0.2724809451 |
| PubMed_21979375_A2 | Down | -0.0509596021 |
| GSE35957 | Up | 0.0338816913 |
| GSE36640 | Up | 0.1156014464 |
| GSE54402 | Down | -0.0203143747 |
| GSE9593 | Up | 0.1790209687 |
| GSE43922 | Up | 0.0135543425 |
| GSE24585 | Up | 0.0242143570 |
| GSE37065 | Down | -0.0654747704 |
| GSE28863_A1 | Up | 0.0054412663 |
| GSE28863_A2 | Up | 0.0835498798 |
| GSE28863_A3 | Up | 0.0724606551 |
| GSE28863_A4 | Up | 0.0527478998 |
| GSE48662 | Up | 0.0325190439 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
