HCSGD entry for CNTN6

1. General information

Official gene symbolCNTN6
Entrez ID27255
Gene full namecontactin 6
Other gene symbolsNB3
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005886Plasma membraneIEAcellular_component
GO:0007155Cell adhesionIEAbiological_process
GO:0007219Notch signaling pathwayIEAbiological_process
GO:0007411Axon guidanceTASbiological_process
GO:0007417Central nervous system developmentTASbiological_process
GO:0031225Anchored component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.46133928040.94757780860.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.2320488715
GSE13712_SHEARDown-0.0211076210
GSE13712_STATICUp0.1398540344
GSE19018Down-0.0337819526
GSE19899_A1Up0.2053199137
GSE19899_A2Up0.1508614784
PubMed_21979375_A1Up0.2724809451
PubMed_21979375_A2Down-0.0509596021
GSE35957Up0.0338816913
GSE36640Up0.1156014464
GSE54402Down-0.0203143747
GSE9593Up0.1790209687
GSE43922Up0.0135543425
GSE24585Up0.0242143570
GSE37065Down-0.0654747704
GSE28863_A1Up0.0054412663
GSE28863_A2Up0.0835498798
GSE28863_A3Up0.0724606551
GSE28863_A4Up0.0527478998
GSE48662Up0.0325190439

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.