HCSGD entry for SALL3

1. General information

Official gene symbolSALL3
Entrez ID27164
Gene full namesal-like 3 (Drosophila)
Other gene symbolsZNF796
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003676Nucleic acid bindingIEAmolecular_function
GO:0003677DNA bindingIEAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0021891Olfactory bulb interneuron developmentIEAbiological_process
GO:0035136Forelimb morphogenesisIEAbiological_process
GO:0035137Hindlimb morphogenesisIEAbiological_process
GO:0045879Negative regulation of smoothened signaling pathwayIEAbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.54438740170.89447232250.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0446454371
GSE13712_SHEARDown-0.0019999311
GSE13712_STATICDown-0.0041461024
GSE19018Up0.0578925905
GSE19899_A1Up0.0721992668
GSE19899_A2Up0.1062440047
PubMed_21979375_A1Up0.0107030843
PubMed_21979375_A2Up0.2254752625
GSE35957Up0.0512186404
GSE36640Up0.0136673538
GSE54402Up0.0445943413
GSE9593Down-0.0526569207
GSE43922Up0.1165393610
GSE24585Up0.0608290393
GSE37065Down-0.1727286595
GSE28863_A1Down-0.0721376103
GSE28863_A2Down-0.0513495041
GSE28863_A3Up0.4330932241
GSE28863_A4Up0.1459699364
GSE48662Up0.0363783540

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-615-3pMIMAT0003283MIRT040159CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.