HCSGD entry for SSBP3
1. General information
| Official gene symbol | SSBP3 |
|---|---|
| Entrez ID | 23648 |
| Gene full name | single stranded DNA binding protein 3 |
| Other gene symbols | CSDP SSDP SSDP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003697 | Single-stranded DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006461 | Protein complex assembly | IEA | biological_process |
| GO:0008284 | Positive regulation of cell proliferation | IEA | biological_process |
| GO:0021501 | Prechordal plate formation | IEA | biological_process |
| GO:0021547 | Midbrain-hindbrain boundary initiation | IEA | biological_process |
| GO:0043234 | Protein complex | IEA | cellular_component |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
| GO:0060323 | Head morphogenesis | IEA | biological_process |
| GO:2000744 | Positive regulation of anterior head development | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0105284868 | 0.7267383268 | 0.2614342453 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.4705725879 |
| GSE13712_SHEAR | Up | 0.1949600562 |
| GSE13712_STATIC | Up | 0.0980460921 |
| GSE19018 | Down | -0.5463622510 |
| GSE19899_A1 | Up | 0.3368073012 |
| GSE19899_A2 | Up | 1.4961624776 |
| PubMed_21979375_A1 | Up | 0.9333077369 |
| PubMed_21979375_A2 | Up | 1.9310494328 |
| GSE35957 | Down | -0.1793017080 |
| GSE36640 | Up | 0.1707664910 |
| GSE54402 | Up | 1.2310032345 |
| GSE9593 | Down | -0.3999183430 |
| GSE43922 | Up | 0.4285180879 |
| GSE24585 | Up | 0.0570395301 |
| GSE37065 | Up | 0.1444654518 |
| GSE28863_A1 | Up | 0.0822420176 |
| GSE28863_A2 | Down | -0.0468098823 |
| GSE28863_A3 | Up | 0.0808830162 |
| GSE28863_A4 | Up | 0.2384525950 |
| GSE48662 | Up | 0.1921183570 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
