HCSGD entry for SSBP3

1. General information

Official gene symbolSSBP3
Entrez ID23648
Gene full namesingle stranded DNA binding protein 3
Other gene symbolsCSDP SSDP SSDP1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003697Single-stranded DNA bindingIEAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006461Protein complex assemblyIEAbiological_process
GO:0008284Positive regulation of cell proliferationIEAbiological_process
GO:0021501Prechordal plate formationIEAbiological_process
GO:0021547Midbrain-hindbrain boundary initiationIEAbiological_process
GO:0043234Protein complexIEAcellular_component
GO:0045944Positive regulation of transcription from RNA polymerase II promoterIEAbiological_process
GO:0060323Head morphogenesisIEAbiological_process
GO:2000744Positive regulation of anterior head developmentIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.01052848680.72673832680.26143424531.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.4705725879
GSE13712_SHEARUp0.1949600562
GSE13712_STATICUp0.0980460921
GSE19018Down-0.5463622510
GSE19899_A1Up0.3368073012
GSE19899_A2Up1.4961624776
PubMed_21979375_A1Up0.9333077369
PubMed_21979375_A2Up1.9310494328
GSE35957Down-0.1793017080
GSE36640Up0.1707664910
GSE54402Up1.2310032345
GSE9593Down-0.3999183430
GSE43922Up0.4285180879
GSE24585Up0.0570395301
GSE37065Up0.1444654518
GSE28863_A1Up0.0822420176
GSE28863_A2Down-0.0468098823
GSE28863_A3Up0.0808830162
GSE28863_A4Up0.2384525950
GSE48662Up0.1921183570

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.