HCSGD entry for COL22A1

1. General information

Official gene symbolCOL22A1
Entrez ID169044
Gene full namecollagen, type XXII, alpha 1
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005576Extracellular regionTAScellular_component
GO:0005581CollagenIEAcellular_component
GO:0005788Endoplasmic reticulum lumenTAScellular_component
GO:0030198Extracellular matrix organizationTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.04014619890.96932735080.44965451061.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0253332163
GSE13712_SHEARDown-0.0554753611
GSE13712_STATICUp0.0160580148
GSE19018Up0.1129269374
GSE19899_A1Up0.2683952782
GSE19899_A2Up0.4661192265
PubMed_21979375_A1Up1.5160211112
PubMed_21979375_A2Up0.6775583418
GSE35957Up0.3960881278
GSE36640Up0.0131706621
GSE54402Up1.4620675593
GSE9593Up0.0367199664
GSE43922Up0.0377930770
GSE24585Up0.1131823507
GSE37065Down-0.1212858388
GSE28863_A1Down-0.1323363152
GSE28863_A2Down-0.0227253538
GSE28863_A3Up0.3465154437
GSE28863_A4Up0.0703446001
GSE48662Down-0.1505430781

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.