HCSGD entry for COL22A1

1. General information

Official gene symbolCOL22A1
Entrez ID169044
Gene full namecollagen, type XXII, alpha 1
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005576Extracellular regionTAScellular_component
GO:0005581CollagenIEAcellular_component
GO:0005788Endoplasmic reticulum lumenTAScellular_component
GO:0030198Extracellular matrix organizationTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.04014619890.96932735080.44965451061.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0253332163
GSE13712_SHEARDown-0.0554753611
GSE13712_STATICUp0.0160580148
GSE19018Up0.1129269374
GSE19899_A1Up0.2683952782
GSE19899_A2Up0.4661192265
PubMed_21979375_A1Up1.5160211112
PubMed_21979375_A2Up0.6775583418
GSE35957Up0.3960881278
GSE36640Up0.0131706621
GSE54402Up1.4620675593
GSE9593Up0.0367199664
GSE43922Up0.0377930770
GSE24585Up0.1131823507
GSE37065Down-0.1212858388
GSE28863_A1Down-0.1323363152
GSE28863_A2Down-0.0227253538
GSE28863_A3Up0.3465154437
GSE28863_A4Up0.0703446001
GSE48662Down-0.1505430781

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.