HCSGD entry for TRIM50

1. General information

Official gene symbolTRIM50
Entrez ID135892
Gene full nametripartite motif containing 50
Other gene symbolsTRIM50A
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005737CytoplasmIEAcellular_component
GO:0008270Zinc ion bindingIEAmolecular_function
GO:0016874Ligase activityIEAmolecular_function
GO:0043231Intracellular membrane-bounded organelleIDAcellular_component
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.48720545190.53123436420.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0181624336
GSE13712_SHEARDown-0.0201043534
GSE13712_STATICDown-0.0751924979
GSE19018Up0.1231187662
GSE19899_A1Down-0.0095684091
GSE19899_A2Up0.1767562985
PubMed_21979375_A1Down-0.0839664145
PubMed_21979375_A2Down-0.0516488717
GSE35957Up0.1700139336
GSE36640Up0.1603565562
GSE54402Down-0.0030818958
GSE9593Up0.0328309491
GSE43922Up0.0386870539
GSE24585Up0.4477117825
GSE37065Up0.0407340647
GSE28863_A1Down-0.0816169863
GSE28863_A2Down-0.0758939462
GSE28863_A3Up0.1807421178
GSE28863_A4Down-0.6718828253
GSE48662Up0.1283361604

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT018041MicroarrayFunctional MTI (Weak)18185580
Entries Per Page
Displaying Page of
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.