HCSGD entry for COL11A2

1. General information

Official gene symbolCOL11A2
Entrez ID1302
Gene full namecollagen, type XI, alpha 2
Other gene symbolsDFNA13 DFNB53 FBCG2 HKE5 PARP STL3
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001501Skeletal system developmentIMP NASbiological_process
GO:0001503OssificationIEAbiological_process
GO:0001894Tissue homeostasisIEAbiological_process
GO:0002062Chondrocyte differentiationIEAbiological_process
GO:0005201Extracellular matrix structural constituentIEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005576Extracellular regionTAScellular_component
GO:0005581CollagenIEAcellular_component
GO:0005592Collagen type XIIEA NAScellular_component
GO:0005788Endoplasmic reticulum lumenTAScellular_component
GO:0005840RibosomeIEAcellular_component
GO:0007605Sensory perception of soundIEA IMPbiological_process
GO:0022617Extracellular matrix disassemblyTASbiological_process
GO:0030020Extracellular matrix structural constituent conferring tensile strengthNASmolecular_function
GO:0030198Extracellular matrix organizationTASbiological_process
GO:0030199Collagen fibril organizationIDA IEAbiological_process
GO:0030574Collagen catabolic processTASbiological_process
GO:0030674Protein binding, bridgingNASmolecular_function
GO:0046872Metal ion bindingIEAmolecular_function
GO:0048705Skeletal system morphogenesisIEAbiological_process
GO:0051216Cartilage developmentIMPbiological_process
GO:0060021Palate developmentIMPbiological_process
GO:0060023Soft palate developmentIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.53989405420.86187386500.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0482614788
GSE13712_SHEARUp0.0950261315
GSE13712_STATICUp0.0895962686
GSE19018Up0.0324323118
GSE19899_A1Up0.1218394976
GSE19899_A2Up0.1347241164
PubMed_21979375_A1Down-0.0093967012
PubMed_21979375_A2Down-0.0445899268
GSE35957Up0.0592747923
GSE36640Up0.0655837015
GSE54402Down-0.1143229505
GSE9593Up0.0554472562
GSE43922Down-0.1015466344
GSE24585Down-0.0553752895
GSE37065Up0.0358085287
GSE28863_A1Down-0.0438286377
GSE28863_A2Down-0.0383457417
GSE28863_A3Up0.3678602053
GSE28863_A4Up0.1849168218
GSE48662Up0.1617025876

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.