HCSGD entry for COL11A2

1. General information

Official gene symbolCOL11A2
Entrez ID1302
Gene full namecollagen, type XI, alpha 2
Other gene symbolsDFNA13 DFNB53 FBCG2 HKE5 PARP STL3
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001501Skeletal system developmentIMP NASbiological_process
GO:0001503OssificationIEAbiological_process
GO:0001894Tissue homeostasisIEAbiological_process
GO:0002062Chondrocyte differentiationIEAbiological_process
GO:0005201Extracellular matrix structural constituentIEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005576Extracellular regionTAScellular_component
GO:0005581CollagenIEAcellular_component
GO:0005592Collagen type XIIEA NAScellular_component
GO:0005788Endoplasmic reticulum lumenTAScellular_component
GO:0005840RibosomeIEAcellular_component
GO:0007605Sensory perception of soundIEA IMPbiological_process
GO:0022617Extracellular matrix disassemblyTASbiological_process
GO:0030020Extracellular matrix structural constituent conferring tensile strengthNASmolecular_function
GO:0030198Extracellular matrix organizationTASbiological_process
GO:0030199Collagen fibril organizationIDA IEAbiological_process
GO:0030574Collagen catabolic processTASbiological_process
GO:0030674Protein binding, bridgingNASmolecular_function
GO:0046872Metal ion bindingIEAmolecular_function
GO:0048705Skeletal system morphogenesisIEAbiological_process
GO:0051216Cartilage developmentIMPbiological_process
GO:0060021Palate developmentIMPbiological_process
GO:0060023Soft palate developmentIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.53989405420.86187386500.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0482614788
GSE13712_SHEARUp0.0950261315
GSE13712_STATICUp0.0895962686
GSE19018Up0.0324323118
GSE19899_A1Up0.1218394976
GSE19899_A2Up0.1347241164
PubMed_21979375_A1Down-0.0093967012
PubMed_21979375_A2Down-0.0445899268
GSE35957Up0.0592747923
GSE36640Up0.0655837015
GSE54402Down-0.1143229505
GSE9593Up0.0554472562
GSE43922Down-0.1015466344
GSE24585Down-0.0553752895
GSE37065Up0.0358085287
GSE28863_A1Down-0.0438286377
GSE28863_A2Down-0.0383457417
GSE28863_A3Up0.3678602053
GSE28863_A4Up0.1849168218
GSE48662Up0.1617025876

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.