HCSGD entry for CNGA3
1. General information
| Official gene symbol | CNGA3 |
|---|---|
| Entrez ID | 1261 |
| Gene full name | cyclic nucleotide gated channel alpha 3 |
| Other gene symbols | ACHM2 CCNC1 CCNCa CCNCalpha CNCG3 CNG3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005216 | Ion channel activity | IEA | molecular_function |
| GO:0005222 | Intracellular cAMP activated cation channel activity | IBA | molecular_function |
| GO:0005223 | Intracellular cGMP activated cation channel activity | IBA | molecular_function |
| GO:0005249 | Voltage-gated potassium channel activity | IBA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005887 | Integral component of plasma membrane | IBA | cellular_component |
| GO:0006810 | Transport | TAS | biological_process |
| GO:0007165 | Signal transduction | TAS | biological_process |
| GO:0007601 | Visual perception | IEA | biological_process |
| GO:0007603 | Phototransduction, visible light | IBA | biological_process |
| GO:0015276 | Ligand-gated ion channel activity | TAS | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030425 | Dendrite | IEA | cellular_component |
| GO:0030553 | CGMP binding | IBA | molecular_function |
| GO:0031960 | Response to corticosteroid | IEA | biological_process |
| GO:0032026 | Response to magnesium ion | IEA | biological_process |
| GO:0034765 | Regulation of ion transmembrane transport | IBA | biological_process |
| GO:0042391 | Regulation of membrane potential | IBA | biological_process |
| GO:0042622 | Photoreceptor outer segment membrane | IEA | cellular_component |
| GO:0043204 | Perikaryon | IEA | cellular_component |
| GO:0046549 | Retinal cone cell development | IEA | biological_process |
| GO:0051049 | Regulation of transport | IBA | biological_process |
| GO:0051591 | Response to cAMP | IEA | biological_process |
| GO:0071805 | Potassium ion transmembrane transport | IBA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3030622203 | 0.9330894229 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2332532856 |
| GSE13712_SHEAR | Up | 0.1945242448 |
| GSE13712_STATIC | Down | -0.1498753538 |
| GSE19018 | Up | 0.2242340303 |
| GSE19899_A1 | Down | -0.0362787075 |
| GSE19899_A2 | Up | 0.0741202818 |
| PubMed_21979375_A1 | Down | -0.1627451463 |
| PubMed_21979375_A2 | Up | 0.3022603597 |
| GSE35957 | Up | 0.0347716366 |
| GSE36640 | Up | 0.0067773355 |
| GSE54402 | Down | -0.0505943456 |
| GSE9593 | Up | 0.1935816338 |
| GSE43922 | Up | 0.0214473926 |
| GSE24585 | Down | -0.0811310966 |
| GSE37065 | Down | -0.0308196377 |
| GSE28863_A1 | Down | -0.0127901082 |
| GSE28863_A2 | Up | 0.1910972543 |
| GSE28863_A3 | Up | 0.3838063188 |
| GSE28863_A4 | Up | 0.1569445378 |
| GSE48662 | Down | -0.0188426628 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
