HCSGD entry for CNGA3

1. General information

Official gene symbolCNGA3
Entrez ID1261
Gene full namecyclic nucleotide gated channel alpha 3
Other gene symbolsACHM2 CCNC1 CCNCa CCNCalpha CNCG3 CNG3
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005216Ion channel activityIEAmolecular_function
GO:0005222Intracellular cAMP activated cation channel activityIBAmolecular_function
GO:0005223Intracellular cGMP activated cation channel activityIBAmolecular_function
GO:0005249Voltage-gated potassium channel activityIBAmolecular_function
GO:0005737CytoplasmIEAcellular_component
GO:0005887Integral component of plasma membraneIBAcellular_component
GO:0006810TransportTASbiological_process
GO:0007165Signal transductionTASbiological_process
GO:0007601Visual perceptionIEAbiological_process
GO:0007603Phototransduction, visible lightIBAbiological_process
GO:0015276Ligand-gated ion channel activityTASmolecular_function
GO:0016021Integral component of membraneIEAcellular_component
GO:0030425DendriteIEAcellular_component
GO:0030553CGMP bindingIBAmolecular_function
GO:0031960Response to corticosteroidIEAbiological_process
GO:0032026Response to magnesium ionIEAbiological_process
GO:0034765Regulation of ion transmembrane transportIBAbiological_process
GO:0042391Regulation of membrane potentialIBAbiological_process
GO:0042622Photoreceptor outer segment membraneIEAcellular_component
GO:0043204PerikaryonIEAcellular_component
GO:0046549Retinal cone cell developmentIEAbiological_process
GO:0051049Regulation of transportIBAbiological_process
GO:0051591Response to cAMPIEAbiological_process
GO:0071805Potassium ion transmembrane transportIBAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.30306222030.93308942290.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.2332532856
GSE13712_SHEARUp0.1945242448
GSE13712_STATICDown-0.1498753538
GSE19018Up0.2242340303
GSE19899_A1Down-0.0362787075
GSE19899_A2Up0.0741202818
PubMed_21979375_A1Down-0.1627451463
PubMed_21979375_A2Up0.3022603597
GSE35957Up0.0347716366
GSE36640Up0.0067773355
GSE54402Down-0.0505943456
GSE9593Up0.1935816338
GSE43922Up0.0214473926
GSE24585Down-0.0811310966
GSE37065Down-0.0308196377
GSE28863_A1Down-0.0127901082
GSE28863_A2Up0.1910972543
GSE28863_A3Up0.3838063188
GSE28863_A4Up0.1569445378
GSE48662Down-0.0188426628

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.